PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OGLUM03G35790.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza
Family NAC
Protein Properties Length: 374aa    MW: 41630.9 Da    PI: 7.9146
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OGLUM03G35790.1genomeOGEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.22e-50391742128
              NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                       pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp +++ ++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s
  OGLUM03G35790.1  39 LPGFRFHPTDEELVTFYLRRKVARKSLSI-EIIKEMDIYKHDPWDLPkASTVGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYS 131
                      69***************************.89***************445556889************************************** PP

              NAM  95 k.........kgelvglkktLvfykgrapkgektdWvmheyrl 128
                      +         +ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
  OGLUM03G35790.1 132 AaataavnsnSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 174
                      98888887777777***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100553.75138201IPR003441NAC domain
SuperFamilySSF1019412.22E-5438201IPR003441NAC domain
PfamPF023658.9E-2540174IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005992Biological Processtrehalose biosynthetic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006561Biological Processproline biosynthetic process
GO:0009718Biological Processanthocyanin-containing compound biosynthetic process
GO:0010120Biological Processcamalexin biosynthetic process
GO:0042538Biological Processhyperosmotic salinity response
GO:1900056Biological Processnegative regulation of leaf senescence
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MVTSKEFARD QAAMDKKIKS NVGEVVLAGD EEEDGDVVLP GFRFHPTDEE LVTFYLRRKV  60
ARKSLSIEII KEMDIYKHDP WDLPKASTVG GEKEWYFFCL RGRKYRNSIR PNRVTGSGFW  120
KATGIDRPIY SAAATAAVNS NSGESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPAIAA  180
ADASPCMQKA EVWTICRIFK RSITYRKQQQ QQQQAWRPPA PATVTVKAPP PGDSSSNTGS  240
FESDGGGDEF MNCGLTPAIS QQQHGGAGRH QMMSTMSCNG GYFFNDGIHH SHSHHKLHHS  300
QWGSLQMALP APEPKPEPEQ KPLSSPAMTI AFHQNDHGFP AAAADFYKDG YLEEIARMME  360
VADPSPTGFY DCRY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-484020719171NO APICAL MERISTEM PROTEIN
1ut4_B6e-484020719171NO APICAL MERISTEM PROTEIN
1ut7_A6e-484020719171NO APICAL MERISTEM PROTEIN
1ut7_B6e-484020719171NO APICAL MERISTEM PROTEIN
3swm_A7e-484020722174NAC domain-containing protein 19
3swm_B7e-484020722174NAC domain-containing protein 19
3swm_C7e-484020722174NAC domain-containing protein 19
3swm_D7e-484020722174NAC domain-containing protein 19
3swp_A7e-484020722174NAC domain-containing protein 19
3swp_B7e-484020722174NAC domain-containing protein 19
3swp_C7e-484020722174NAC domain-containing protein 19
3swp_D7e-484020722174NAC domain-containing protein 19
4dul_A6e-484020719171NAC domain-containing protein 19
4dul_B6e-484020719171NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00310DAPTransfer from AT2G43000Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK0735390.0AK073539.1 Oryza sativa Japonica Group cDNA clone:J033041C24, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015628846.10.0PREDICTED: transcription factor JUNGBRUNNEN 1
SwissprotQ9SK551e-83NAC42_ARATH; Transcription factor JUNGBRUNNEN 1
TrEMBLA0A0D9ZDV60.0A0A0D9ZDV6_9ORYZ; Uncharacterized protein
STRINGLOC_Os03g56580.10.0(Oryza sativa Japonica Group)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP119138129
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-83NAC domain containing protein 42